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For the Inventor, By the Inventor

Newtonville, MA, United States of America

Bonnie Berger Leighton

This inventor holds 17 USPTO granted patents and 12 published patent applications and 2 EPO patents, primarily in Computational Biology. Top assignees: Ne47 Bio, Inc., Other. Active years: 2011-2024.

IDiyas Innovation Intelligence. (2026). Inventor Profile: Bonnie Berger Leighton. Retrieved from https://idiyas.com/inventor/bonnie-berger-leighton

Data source: USPTO (United States Patent and Trademark Office) public patent records. Weekly synchronization. How IDiyas builds this profile

USPTO Granted Patents = 17 

% Patents Active = 100.0

 

Average Co-Inventor Count = 2.8

ph-index = 5

Forward Citations = 73(Granted Patents)


Location History:

  • Cambridge, MA (US) (2017 - 2020)
  • Newton, MA (US) (2021)
  • Newtonville, MA (US) (2011 - 2024)

Company Filing History:

goldMedal1 out of 1 
 
Ne47 Bio, Inc.
 patent
silverMedal14 out of 834,570 
Other
 patents
where one patent can have more than one assignee

Years Active: 2011-2024

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Areas of Expertise:
Genomic Data Compression
Neural Networks
Information Retrieval
Next-Generation Sequencing
Pharmacological Collaboration
Quality Score Compression
Therapeutic Development
Protein Database Search
Crowdsourcing
Stochastic Processes
Clinical Queries
Network Similarity
17 patents (USPTO):Explore Patents
1. 12013863 - Multi-resolution modeling of discrete stochastic processes for computationally-efficient information search and retrieval (2024-06-18),
2. 11762813 - Quality score compression apparatus and method for improving downstream accuracy (2023-09-19),
3. 11632125 - Compressively-accelerated read mapping framework for next-generation sequencing (2023-04-18),
4. 11532378 - Protein database search using learned representations (2022-12-20),
5. 11450439 - Realizing private and practical pharmacological collaboration using a neural network architecture configured for reduced computation overhead (2022-09-20),
6. 11308101 - Multi-resolution modeling of discrete stochastic processes for computationally-efficient information search and retrieval (2022-04-19),
7. 11031950 - Compressively-accelerated read mapping framework for next-generation sequencing (2021-06-08),
8. 11011253 - Escape profiling for therapeutic and vaccine development (2021-05-18),
9. 10910087 - Secure secret-sharing-based crowdsourcing for large-scale association studies of genomic and phenotypic data (2021-02-02),
10. 10777304 - Compressing, storing and searching sequence data (2020-09-15),
11. 10230390 - Compressively-accelerated read mapping framework for next-generation sequencing (2019-03-12),
12. 10198454 - Quality score compression for improving downstream genotyping accuracy (2019-02-05),
13. 9715574 - Compressing, storing and searching sequence data (2017-07-25),
14. 9262484 - Method for identifying network similarity by matching neighborhood topology (2016-02-16),
15. 8838628 - Intelligent search tool for answering clinical queries (2014-09-16),

Title: The Innovative Contributions of Bonnie Berger Leighton

Introduction

Bonnie Berger Leighton is a prominent inventor based in Newtonville, MA (US). She has made significant contributions to the field of computational biology, holding a total of 17 patents. Her work focuses on improving the efficiency and accuracy of genomic data analysis, which has important implications for cancer research and treatment.

Latest Patents

One of her latest patents is titled "Multi-resolution modeling of discrete stochastic processes for computationally-efficient information search and retrieval." This invention models activities of interest using non-stationary discrete stochastic processes, such as patterns of mutations across cancer genomes. The model predicts rate parameters and their associated uncertainties, allowing for the identification of genomic elements with unexpected mutation rates, which may indicate previously unknown driver mutations.

Another notable patent is the "Quality score compression apparatus and method for improving downstream accuracy." This invention provides a highly-efficient tool for compressing quality scores by leveraging sequence redundancy. The method ensures that the accuracy of genomic data is maintained while reducing the size of the data, which is crucial for efficient data processing.

Career Highlights

Throughout her career, Bonnie has worked with various companies, including Ne47 Bio, Inc. Her innovative approaches have positioned her as a leader in her field, contributing to advancements in genomic research and technology.

Collaborations

Bonnie has collaborated with notable colleagues such as Deniz Yorukoglu and Jian Peng. These partnerships have further enhanced her research and development efforts, leading to impactful innovations in computational biology.

Conclusion

Bonnie Berger Leighton is a trailblazer in the realm of genomic data analysis, with her patents reflecting her commitment to advancing the field. Her work not only contributes to scientific knowledge but also has the potential to improve patient outcomes in cancer treatment.

Profile summary based on public USPTO records.
Data Sources: USPTO Patent Grant XML, Patent Center, EPO & CIPO • Normalized by IDiyas Innovation Graph. Methodology & provenance architecturePlease report any incorrect information to [email protected]
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