The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Sep. 09, 2014

Filed:

Mar. 09, 2012
Applicants:

Kuo Ping Chiu, Taipei, TW;

Yi Chou, Taipei, TW;

Sheng-chung Chen, Taipei, TW;

Inventors:

Kuo Ping Chiu, Taipei, TW;

Yi Chou, Taipei, TW;

Sheng-Chung Chen, Taipei, TW;

Assignee:

Academia Sinica, Taipei, TW;

Attorneys:
Primary Examiner:
Int. Cl.
CPC ...
C07H 21/00 (2006.01); G01N 33/487 (2006.01); C12P 19/34 (2006.01); C12N 15/66 (2006.01); C12N 15/65 (2006.01);
U.S. Cl.
CPC ...
C12N 15/66 (2013.01); C12P 19/34 (2013.01); C12N 15/65 (2013.01);
Abstract

A method of generating a barcoded Paired-End Ditag (bPED) nucleic acid fragment is disclosed. The method comprises: a) performing a first ligation by ligating a half-adaptor with one or two 3'-overhanging ends to a target nucleic acid to obtain a nucleic acid fragment with two ends each attached to one of the half-adaptor, the half adaptor comprising a half-barcode and a restriction enzyme (RE) recognition site; b) performing a second ligation by ligating two of the half-adaptor at the two ends of the nucleic acid fragment to form a circularized nucleic acid construct, wherein the circularized nucleic acid construct comprises a full-size barcoded adaptor; and c) digesting the circularized nucleic acid construct with a RE that cleaves at a defined distance from the RE recognition site, and thereby generating the bPED nucleic acid fragment.


Find Patent Forward Citations

Loading…