The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Aug. 13, 2024

Filed:

Sep. 18, 2019
Applicant:

The Chinese University of Hong Kong, Shatin, HK;

Inventors:

Yuk-Ming Dennis Lo, Hong Kong, CN;

Peiyong Jiang, Hong Kong, CN;

Kwan Chee Chan, Hong Kong, CN;

Rossa Wai Kwun Chiu, Hong Kong, CN;

Attorney:
Primary Examiner:
Int. Cl.
CPC ...
C12Q 1/6883 (2018.01); C12Q 1/6869 (2018.01); C12Q 1/6888 (2018.01); G16B 20/00 (2019.01);
U.S. Cl.
CPC ...
C12Q 1/6883 (2013.01); C12Q 1/6869 (2013.01); C12Q 1/6888 (2013.01); G16B 20/00 (2019.02); C12Q 2600/156 (2013.01);
Abstract

Embodiments of the present invention provide methods, systems, and apparatus for deducing the fetal DNA fraction in maternal plasma without using paternal or fetal genotypes. Maternal genotype information may be obtained from a maternal-only DNA sample or may be assumed from shallow-depth sequencing of a biological sample having both maternal and fetal DNA molecules. Because sequencing may be at shallow depths, a locus may have only few reads and may fail to exhibit a non-maternal allele even if a non-maternal allele is present. However, normalized parameters that characterize non-maternal alleles sequenced can be used to provide an accurate estimate of the fetal DNA fraction, even if the amount of non-maternal alleles is in error. Methods described herein may not need high-depth sequencing or enrichment of specific regions. As a result, these methods can be integrated into widely used non-invasive prenatal testing and other diagnostics.


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