The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Jun. 06, 2017

Filed:

May. 08, 2014
Applicant:

Population Genetics Technologies Ltd, Cambridge, GB;

Inventors:

James Casbon, Hinxton, GB;

Sydney Brenner, Ely, GB;

Robert Osborne, Great Chesterford, GB;

Conrad Lichtenstein, Cambridge, GB;

Andreas Claas, Saffron Walden, GB;

Assignee:
Attorneys:
Primary Examiner:
Int. Cl.
CPC ...
C12P 19/34 (2006.01); C12Q 1/68 (2006.01); C07H 21/02 (2006.01); C07H 21/04 (2006.01); C07H 21/00 (2006.01); C12Q 1/70 (2006.01); G06F 19/18 (2011.01); C12N 15/10 (2006.01);
U.S. Cl.
CPC ...
C12Q 1/6855 (2013.01); C12N 15/1065 (2013.01); C12Q 1/6869 (2013.01); C12Q 1/6886 (2013.01); C12Q 1/70 (2013.01); G06F 19/18 (2013.01);
Abstract

Aspects of the present invention include methods and compositions for determining the number of individual polynucleotide molecules originating from the same genomic region of the same original sample that have been sequenced in a particular sequence analysis configuration or process. In these aspects of the invention, a degenerate base region (DBR) is attached to the starting polynucleotide molecules that are subsequently sequenced (e.g., after certain process steps are performed, e.g., amplification and/or enrichment). The number of different DBR sequences present in a sequencing run can be used to determine/estimate the number of different starting polynucleotides that have been sequenced. DBRs can be used to enhance numerous different nucleic acid sequence analysis applications, including allowing higher confidence allele call determinations in genotyping applications.


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