The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Nov. 29, 2016

Filed:

Mar. 15, 2013
Applicant:

Adaptive Biotechnologies Corp., Seattle, WA (US);

Inventors:

Malek Faham, Pacifica, CA (US);

Martin Moorhead, San Francisco, CA (US);

Thomas Willis, San Francisco, CA (US);

Jianbiao Zheng, San Francisco, CA (US);

Assignee:

Adaptive Biotechnologies Corp., Seattle, WA (US);

Attorney:
Primary Examiner:
Assistant Examiner:
Int. Cl.
CPC ...
C12Q 1/68 (2006.01); C12P 19/34 (2006.01);
U.S. Cl.
CPC ...
C12Q 1/6888 (2013.01); C12Q 1/6869 (2013.01); C12Q 1/6883 (2013.01); C12Q 2600/158 (2013.01);
Abstract

The invention is directed to the use of sequence tags to improve sequence determination of amplicons of related sequences, particularly large and complex amplicons, such as those comprising recombined nucleic acids encoding immune receptor molecules. In one aspect, sequence reads having the same sequence tags are aligned after which final base calls are determined from a (possibly weighted) average base call from sequence read base calls at each position. Similarly, in another aspect, sequence reads comprising series of incorporation signals are aligned by common sequence tags and base calls in homopolymer regions are made as a function incorporation signal values at each 'flow' position.


Find Patent Forward Citations

Loading…