The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Jul. 17, 2012

Filed:

Dec. 23, 2003
Applicants:

David Raab, Beratshausen, DE;

Marcus Graf, Regensburg, DE;

Frank Notka, Regensburg, DE;

Ralf Wagner, Regensburg, DE;

Inventors:

David Raab, Beratshausen, DE;

Marcus Graf, Regensburg, DE;

Frank Notka, Regensburg, DE;

Ralf Wagner, Regensburg, DE;

Assignee:

Geneart AG, Regensburg, DE;

Attorney:
Primary Examiner:
Int. Cl.
CPC ...
G01N 33/48 (2006.01); C12Q 1/68 (2006.01); G06G 7/58 (2006.01); G06F 7/60 (2006.01); G06F 17/00 (2006.01);
U.S. Cl.
CPC ...
Abstract

The invention relates to a method for optimizing a nucleotide sequence for expression of a protein on the basis of the amino acid sequence of the protein, in which for a particular region there is specification of a test sequence with m optimization positions on which the codon occupation is varied, a quality function being used to ascertain the optimal codon occupation on these optimization positions, and one or more codons of this optimal occupation being specified as codons of the optimized nucleotide sequence. These steps are iterated, with the codons of the optimized nucleotide sequence which are specified in the preceding steps remaining unchanged in subsequent iteration steps. The invention additionally relates to a device for carrying out this method.


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