The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Sep. 12, 2006

Filed:

Jul. 23, 2002
Applicants:

Velin Zlatkov Spassov, San Diego, CA (US);

Liqun Yan, San Diego, CA (US);

Sandor Szalma, San Diego, CA (US);

Inventors:

Velin Zlatkov Spassov, San Diego, CA (US);

Liqun Yan, San Diego, CA (US);

Sandor Szalma, San Diego, CA (US);

Assignee:

Accelrys Software Inc., San Diego, CA (US);

Attorney:
Primary Examiner:
Assistant Examiner:
Int. Cl.
CPC ...
G06F 19/00 (2006.01); G01N 33/48 (2006.01); G01N 31/00 (2006.01); G06G 7/48 (2006.01);
U.S. Cl.
CPC ...
Abstract

The disclosure relates to a method of estimating the polar component of the solvation energy for a molecule embedded in different media. In one embodiment, the molecule is partially embedded in a membrane. For an atom of the molecule, the polar component of the atom's solvation energy is represented as a combination of at least a self-energy term and a screening-effect term. The self-energy term represents the contribution to the atom's polar component made by the membrane and the molecule's other atoms located inside the membrane. The screening-effect term represents the typically negative contribution to the atom's polar component made by the molecule's other atoms located outside the membrane. An analytical function is used to calculate the self-energy term.


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