The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
May. 26, 2026

Filed:

Dec. 14, 2023
Applicant:

Illumina, Inc., San Diego, CA (US);

Inventor:
Assignee:

Illumina, Inc., San Diego, CA (US);

Attorneys:
Primary Examiner:
Int. Cl.
CPC ...
G16B 30/10 (2019.01); G06F 16/23 (2019.01); G16B 20/20 (2019.01); G16B 30/20 (2019.01); G16B 45/00 (2019.01); G16B 50/50 (2019.01);
U.S. Cl.
CPC ...
G16B 30/10 (2019.02); G06F 16/2365 (2019.01); G16B 20/20 (2019.02); G16B 30/20 (2019.02); G16B 45/00 (2019.02); G16B 50/50 (2019.02);
Abstract

Systems, methods, computer programs, and hardware circuits for compressing genomic sequence data. In one aspect, the method can include obtaining a read record, determining whether the read record corresponds to a read that is perfectly mapped to a reference sequence or imperfectly mapped to the reference sequence, based on determining that the read record corresponds to a read that is imperfectly mapped to the reference sequence whether a number of mismatches of the imperfectly mapped read does not exceed a predetermined threshold number of mismatches, and based on determining that the number of mismatches does not exceed the predetermined threshold number of mismatches, (i) obtaining an offset from a previous mismatch that is lower than a maximum encodable offset value and (ii) encoding each mismatch of the imperfectly mapped read and the offset from the previous mismatch of the read into a record having a size of 1 byte.


Find Patent Forward Citations

Quick Actions:

Rizk, Guillaume Alexandre Pascal. (2026). Method for the compression of genome sequence data (U.S. Patent No. 12640233). U.S. Patent and Trademark Office. https://idiyas.com/patent/badge/12640233

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