The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Apr. 14, 2026

Filed:

Oct. 10, 2016
Applicant:

Guardant Health, Inc., Redwood City, CA (US);

Inventors:

Bahram Ghaffarzadeh Kermani, Los Altos, CA (US);

Mohammad Reza Mokhtari, San Lorenzo, CA (US);

Assignee:

Guardant Health, Inc., Palo Alto, CA (US);

Attorney:
Primary Examiner:
Int. Cl.
CPC ...
G16B 30/10 (2019.01); C12Q 1/686 (2018.01); C12Q 1/6869 (2018.01); C12Q 1/6874 (2018.01); C12Q 1/6886 (2018.01); G16B 30/00 (2019.01); G16B 40/00 (2019.01);
U.S. Cl.
CPC ...
G16B 30/10 (2019.02); C12Q 1/686 (2013.01); C12Q 1/6869 (2013.01); C12Q 1/6874 (2013.01); C12Q 1/6886 (2013.01); G16B 30/00 (2019.02); G16B 40/00 (2019.02);
Abstract

Systems and methods are disclosed for determining gene fusion by determining a fused read containing sequencing data of a portion of a fused chromosome DNA molecule; determining a predetermined point on the genome with least one mapped portion of the fused read clipped at the predetermined point (a breakpoint); identifying two mapped read portions from two breakpoints (breakpoint pair) as a potential fusion candidate; creating one or more fusion sets based on breakpoint pairs and clustering the fusion sets into one or more fusion clusters; and identifying each fusion cluster meeting a predetermined criterion as a gene fusion.


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