The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.
The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.
Patent No.:
Date of Patent:
Dec. 16, 2025
Filed:
Sep. 23, 2022
Applicant:
Illumina, Inc., San Diego, CA (US);
Inventors:
Hong Gao, Palo Alto, CA (US);
Tobias Hamp, Cambridge, GB;
Joshua Goodwin Jon Mcmaster-Schraiber, Berkeley, CA (US);
Laksshman Sundaram, Fremont, CA (US);
Kai-How Farh, Hillsborough, CA (US);
Assignee:
Illumina, Inc., San Diego, CA (US);
Attorney:
Primary Examiner:
Int. Cl.
CPC ...
G16B 30/00 (2019.01); G06F 18/2111 (2023.01); G06F 18/214 (2023.01); G06N 3/045 (2023.01); G06N 3/08 (2023.01); G06N 3/126 (2023.01); G06N 20/00 (2019.01); G06N 20/20 (2019.01); G16B 10/00 (2019.01); G16B 20/00 (2019.01); G16B 20/20 (2019.01); G16B 20/40 (2019.01); G16B 30/10 (2019.01); G16B 40/00 (2019.01); G16B 40/20 (2019.01); G16B 40/30 (2019.01); G16B 50/10 (2019.01);
U.S. Cl.
CPC ...
G16B 30/00 (2019.02); G06F 18/2111 (2023.01); G06F 18/2148 (2023.01); G06F 18/2155 (2023.01); G06N 3/045 (2023.01); G06N 3/08 (2013.01); G06N 3/126 (2013.01); G06N 20/00 (2019.01); G06N 20/20 (2019.01); G16B 10/00 (2019.02); G16B 20/00 (2019.02); G16B 20/20 (2019.02); G16B 20/40 (2019.02); G16B 30/10 (2019.02); G16B 40/00 (2019.02); G16B 40/20 (2019.02); G16B 40/30 (2019.02); G16B 50/10 (2019.02);
Abstract
The technology disclosed relates to variant calling of sequenced reads of a sample of a target species against a reference genome of a pseudo-target species. Low-quality variants are identified as false positive variants that are present in the second set of variants but absent from the first set of variants.