The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Sep. 30, 2025

Filed:

Mar. 03, 2023
Applicant:

Illumina, Inc., San Diego, CA (US);

Inventor:
Assignee:

Illumina, Inc., San Diego, CA (US);

Attorneys:
Primary Examiner:
Int. Cl.
CPC ...
G16B 30/10 (2019.01); G16B 20/00 (2019.01); G16B 20/20 (2019.01); G16B 30/00 (2019.01); G16B 40/20 (2019.01);
U.S. Cl.
CPC ...
G16B 30/10 (2019.02); G16B 20/00 (2019.02); G16B 20/20 (2019.02); G16B 30/00 (2019.02); G16B 40/20 (2019.02);
Abstract

Methods, systems, and apparatus, including computer programs encoded on computer-storage media, for software-accelerated genomic data read mapping are described. In some implementations, software-accelerated genomic data read mapping includes obtaining a first k-mer seed from a genomic data read; generating a genomic signature based on a first k-mer seed; determining a reference sequence location using a hash data structure based on the genomic signature; determining a number of mismatches; based on determining the number of mismatches includes one or more mismatches, obtaining, by the one or more computers, a set of k-mer seeds from the genomic data read; and based on the set of k-mer seeds from the genomic data read, selecting, by the one or more computers, an actual alignment for the genomic data read.


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Rizk, Guillaume Alexandre Pascal. (2025). Multi-pass software-accelerated genomic read mapping engine (U.S. Patent No. 12431218). U.S. Patent and Trademark Office. https://idiyas.com/patent/badge/12431218

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