The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Aug. 12, 2025

Filed:

Jan. 21, 2021
Applicant:

International Business Machines Corporation, Armonk, NY (US);

Inventors:

Giacomo Domeniconi, White Plains, NY (US);

Leili Zhang, White Plains, NY (US);

Guojing Cong, Ossining, NY (US);

Chih-Chieh Yang, White Plains, NY (US);

Ruhong Zhou, Fort Lee, NJ (US);

Attorney:
Primary Examiner:
Assistant Examiner:
Int. Cl.
CPC ...
G16B 5/20 (2019.01); G06F 30/27 (2020.01); G06F 111/08 (2020.01); G06T 11/00 (2006.01); G16B 15/30 (2019.01); G16B 40/00 (2019.01);
U.S. Cl.
CPC ...
G16B 5/20 (2019.02); G06F 30/27 (2020.01); G06T 11/00 (2013.01); G16B 15/30 (2019.02); G16B 40/00 (2019.02); G06F 2111/08 (2020.01); G06T 2210/41 (2013.01);
Abstract

A computer-implemented method for executing a computation task in a molecular dynamic simulation includes identifying a bonding target on a ligand; constructing a protein structure; rendering an image of the ligand; subsampling data pertaining to the constructed protein structure and the image of the ligand at a particular frequency; rendering a two-dimensional image of the constructed protein structure relative to the ligand from a plurality of viewpoints; computing optical flows of the protein structure relative to the ligand based on the two-dimensional image; analyzing the optical flows to determine a displacement of atoms; simulating a binding state outcome of the protein structure relative to the ligand for each of the plurality of viewpoints; and predicting a probability of the protein structure binding with the ligand, based on the predicted binding state outcome for each of the plurality of viewpoints.


Find Patent Forward Citations

Loading…