The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Jul. 01, 2025

Filed:

May. 14, 2020
Applicant:

The Regents of the University of California, Oakland, CA (US);

Inventors:

John Zachary Sanborn, Santa Cruz, CA (US);

David Haussler, Santa Cruz, CA (US);

Assignee:
Attorney:
Primary Examiner:
Int. Cl.
CPC ...
G16B 50/30 (2019.01); G06F 3/04845 (2022.01); G06F 40/169 (2020.01); G06N 7/01 (2023.01); G16B 20/00 (2019.01); G16B 20/10 (2019.01); G16B 20/20 (2019.01); G16B 20/40 (2019.01); G16B 30/00 (2019.01); G16B 30/10 (2019.01); G16B 50/00 (2019.01); G16H 10/40 (2018.01); G16H 10/60 (2018.01); G16H 50/20 (2018.01); G16H 50/30 (2018.01);
U.S. Cl.
CPC ...
G16B 50/30 (2019.02); G06F 3/04845 (2013.01); G06F 40/169 (2020.01); G06N 7/01 (2023.01); G16B 20/00 (2019.02); G16B 20/10 (2019.02); G16B 20/20 (2019.02); G16B 20/40 (2019.02); G16B 30/00 (2019.02); G16B 30/10 (2019.02); G16B 50/00 (2019.02); G16H 10/40 (2018.01); G16H 10/60 (2018.01); G16H 50/20 (2018.01); G16H 50/30 (2018.01); Y02A 90/10 (2018.01);
Abstract

A differential sequence object is constructed on the basis of alignment of sub-strings via incremental synchronization of sequence strings using known positions of the sub-strings relative to a reference genome sequence. An output file is then generated that comprises only relevant changes with respect to the reference genome.


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