The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Jun. 25, 2024

Filed:

Oct. 27, 2022
Applicant:

Flagship Pioneering Innovations Vi, Llc, Cambridge, MA (US);

Inventors:

Kevin Kaichuang Yang, Arlington, MA (US);

Jacob D. Feala, Franklin, MA (US);

Maxim Baranov, Medford, MA (US);

Brinda Monian, Medford, MA (US);

Assignee:
Attorney:
Primary Examiner:
Int. Cl.
CPC ...
G01N 33/48 (2006.01); G01N 33/50 (2006.01); G06N 3/08 (2023.01); G16B 15/20 (2019.01); G16B 15/30 (2019.01); G16B 40/20 (2019.01);
U.S. Cl.
CPC ...
G16B 15/30 (2019.02); G06N 3/08 (2013.01); G16B 15/20 (2019.02); G16B 40/20 (2019.02);
Abstract

Humanizing proteins can be a laborious process, often involving trial and error or other non-systematic methods. To improve humanization, neural networks can be employed to generate new protein sequences having higher probabilities of being humanized. In an embodiment, a method includes evaluating the immunogenicity of a sampling of protein sequences. The method can include weighting the sampling of protein sequences from the generative model according to an estimated probability of a particular generated protein sequence having a deviation in immunogenicity than a particular percentile of immunogenicity of the sampling of protein sequences. The method can further include generating a protein sequence weighted sampling of protein sequences. The generated protein sequence representing a protein has an altered immunogenicity. Such a generated protein has a higher likelihood of being humanized.


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