The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Jun. 11, 2024

Filed:

Sep. 25, 2017
Applicant:

Microsoft Technology Licensing, Llc, Redmond, WA (US);

Inventors:

Luis Ceze, Seattle, WA (US);

Sergey Yekhanin, Redmond, WA (US);

Siena Dumas Ang, Seattle, WA (US);

Karin Strauss, Seattle, WA (US);

Cyrus Rashtchian, Seattle, WA (US);

Ravindran Kannan, Oakland, CA (US);

Konstantin Makarychev, Seattle, WA (US);

Assignee:
Attorneys:
Primary Examiner:
Assistant Examiner:
Int. Cl.
CPC ...
G16B 30/10 (2019.01); G06F 16/28 (2019.01); G16B 40/00 (2019.01); G16B 30/20 (2019.01);
U.S. Cl.
CPC ...
G16B 30/10 (2019.02); G06F 16/285 (2019.01); G16B 40/00 (2019.02); G16B 30/20 (2019.02);
Abstract

A technique for clustering DNA reads from polynucleotide sequencing is described. DNA reads with a level of difference that is likely caused by errors in sequencing are grouped together in the same cluster. DNA reads that represent reads of different DNA molecules are placed in different clusters. The clusters are based on edit distance, which is the number of changes necessary to convert a given DNA read into another. The process of forming clusters may be performed iteratively and may use other types of distance that serve as an approximation for edit distance. Well clustered DNA reads provide a starting point for further analysis.


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