The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
May. 21, 2024

Filed:

Jul. 05, 2019
Applicant:

Universität Zürich, Zürich, CH;

Inventors:

Lucas Pelkmans, Zürich, CH;

Gabriele Gut, Münchenstein, CH;

Assignee:
Attorney:
Int. Cl.
CPC ...
G06V 20/69 (2022.01); G01N 1/30 (2006.01); G06F 18/2137 (2023.01); G06F 18/2323 (2023.01); G06V 10/762 (2022.01);
U.S. Cl.
CPC ...
G06V 20/695 (2022.01); G01N 1/30 (2013.01); G06F 18/2137 (2023.01); G06F 18/2323 (2023.01); G06V 10/7635 (2022.01);
Abstract

The invention relates to a method for processing large multiplexed image data of a biological sample, the method comprising the steps of, recording a plurality of images of a biological sample, wherein the plurality of images comprises images having a different entity of the biological sample targeted with a predefined stain, determining spatially corresponding image pixels in the plurality of registered images, associating the spatially corresponding image pixels to a pixel profile, wherein each pixel profile comprises the pixel values of the spatially corresponding pixels and wherein the pixel profile is associated with the respective image coordinate of the spatially corresponding pixels, pooling the pixel profiles by means of a clustering method configured to determine pixel profiles with similar values, and thereby generating a plurality of clusters, each comprising pixel profiles with similar pixel values, for each cluster assigning a cluster value to the image coordinate of the pixel profiles comprised by said cluster and thereby generating a cluster image with cluster pixels.


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