The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Dec. 05, 2023

Filed:

Mar. 18, 2020
Applicant:

Western Digital Technologies, Inc., San Jose, CA (US);

Inventor:

Justin Kinney, San Jose, CA (US);

Assignee:
Attorney:
Primary Examiner:
Assistant Examiner:
Int. Cl.
CPC ...
G16B 30/10 (2019.01); G16B 50/30 (2019.01); G16B 30/20 (2019.01); G06N 7/01 (2023.01); G16B 5/20 (2019.01);
U.S. Cl.
CPC ...
G16B 5/20 (2019.02); G06N 7/01 (2023.01); G16B 30/10 (2019.02); G16B 50/30 (2019.02); G16B 30/20 (2019.02);
Abstract

Methods and systems for processing a plurality of sample reads for genome sequencing include, for each sample read of the plurality of sample reads, comparing substring sequences from the sample read to reference sequences representing different portions of a reference genome. One or more reference sequences are identified that match one or more of the compared substring sequences, and a probabilistic location within the reference genome is determined for the sample read based on the one or more identified reference sequences. The reference genome is partitioned for reference-aligned genome sequencing based on the determined probabilistic locations of the respective sample reads.


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