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The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Patent No.:

US 11769073 B1

PDFFull Text
Date of Patent:
Sep. 26, 2023

Filed:

Nov. 02, 2018

Methods and systems for producing an expanded training set for machine learning using biological sequences

Applicant:

Deep Genomics Incorporated, Toronto, CA;

Inventors:

Brendan John Frey, Toronto, CA;

Andrew Thomas DeLong, Toronto, CA;

Hui Yuan Xiong, Toronto, CA;

Assignee:

DEEP GENOMICS INCORPORATED, Toronto, CA;

Attorney:

Wilson Sonsini Goodrich & Rosati

Primary Examiner:

Russell S Negin

Int. Cl.
CPC ...
G01N 33/48 (2006.01); G01N 33/50 (2006.01); G06N 20/00 (2019.01); G16B 30/00 (2019.01); G16B 40/00 (2019.01); G16B 40/20 (2019.01); G16B 40/30 (2019.01); G06F 18/2411 (2023.01); G06N 3/047 (2023.01); G16B 5/00 (2019.01); G06N 3/088 (2023.01); G06N 7/00 (2023.01);
U.S. Cl.
CPC ...
G06N 20/00 (2019.01); G06F 18/2411 (2023.01); G06N 3/047 (2023.01); G06N 3/088 (2013.01); G06N 7/00 (2013.01); G16B 5/00 (2019.02); G16B 30/00 (2019.02); G16B 40/00 (2019.02); G16B 40/20 (2019.02); G16B 40/30 (2019.02);
Abstract

Methods and systems for expanding a training set of one or more original biological sequences are provided. An original training set is obtained, wherein the original training set comprises one or more original biological sequences. Saliency values corresponding to one or more elements in each of the one or more original biological sequences are obtained. For each of the original biological sequences, one or more modified biological sequences are produced and the one or more modified biological sequences are associated with the original biological sequence. One or more elements are generated in each of the one or more modified biological sequences using one or more elements in the associated original biological sequence and the corresponding saliency values. The one or more modified biological sequences for each of the original biological sequences are added to the original training set to form an expanded training set.

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