The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Sep. 19, 2023

Filed:

May. 01, 2020
Applicant:

Ultima Genomics, Inc., Newark, CA (US);

Inventors:

Yoav Etzioni, Tel Aviv, IL;

Simchon Faigler, Bet Izhak, IL;

Gilad Almogy, Palo Alto, CA (US);

Mark Pratt, Bozeman, MT (US);

Florian Oberstrass, Menlo Park, CA (US);

Assignee:

Ultima Genomics, Inc., Newark, CA (US);

Attorney:
Primary Examiner:
Assistant Examiner:
Int. Cl.
CPC ...
G16B 20/20 (2019.01); C12Q 1/6874 (2018.01); G16B 30/10 (2019.01); G06F 17/00 (2019.01); G16B 20/00 (2019.01); G16B 30/00 (2019.01); G01N 21/64 (2006.01);
U.S. Cl.
CPC ...
G16B 20/20 (2019.02); C12Q 1/6874 (2013.01); G06F 17/00 (2013.01); G16B 20/00 (2019.02); G16B 30/00 (2019.02); G16B 30/10 (2019.02); C12Q 2600/156 (2013.01); C12Q 2600/158 (2013.01); G01N 2021/6439 (2013.01);
Abstract

Methods for detecting a short genetic variant in a test sample are described herein. In some exemplary methods, the short genetic variant is called using one or more match scores, which are determined using one or more sequencing data sets obtained from a test nucleic acid molecule, wherein the test sequencing data sets are determined by sequencing the test nucleic acid molecule using non-terminating nucleotides provided in separate nucleotide flows according to a flow-cycle order. Also described herein are methods of sequencing a test nucleic acid molecule using two or more different flow-cycle orders and/or extended flow cycle orders having five or more nucleotide flows per flow cycle.


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