The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Nov. 29, 2022

Filed:

Aug. 28, 2020
Applicants:

The Hospital for Sick Children, Toronto, CA;

The Governing Council of the University of Toronto, Toronto, CA;

Inventors:

Johanna M. Rommens, Toronto, CA;

Lisa Strug, Toronto, CA;

Lei Sun, Toronto, CA;

Attorneys:
Primary Examiner:
Int. Cl.
CPC ...
C12Q 1/6883 (2018.01); C12Q 1/68 (2018.01); A61K 31/4245 (2006.01); A61K 31/47 (2006.01); G01N 33/48 (2006.01); C07K 14/705 (2006.01); C07D 271/06 (2006.01); C07D 405/12 (2006.01); C07D 215/233 (2006.01); A61P 11/00 (2006.01); A61K 31/443 (2006.01); G01N 33/68 (2006.01);
U.S. Cl.
CPC ...
A61K 31/4245 (2013.01); A61K 31/443 (2013.01); A61K 31/47 (2013.01); A61P 11/00 (2018.01); C07D 215/233 (2013.01); C07D 271/06 (2013.01); C07D 405/12 (2013.01); C07K 14/705 (2013.01); C12Q 1/68 (2013.01); C12Q 1/6883 (2013.01); G01N 33/48 (2013.01); G01N 33/6872 (2013.01); G01N 33/6893 (2013.01); C12Q 2600/106 (2013.01); C12Q 2600/156 (2013.01); C12Q 2600/158 (2013.01); G01N 2800/12 (2013.01);
Abstract

Described herein is a genetic modifier of cystic fibrosis (CF), which may serve as a predictor of the efficacy of a CFTR-directed therapy. SNPs rs7512462 or rs2869027 in non-coding regions of SLC26A9 are shown to correlate with CF lung disease severity in patients having CFTR mutations that leave protein at the cell surface, e.g. gating mutations such as G551D. It is also shown that patient response to Ivacaftor correlates with SLC26A9 genotype. Given the biology of SLC26A9, risk alleles of SLC26A9 should correlate with reduced SLC26A9. SLC26A9 activity (marked by e.g. genotype or expression level) is therefore a predictor of treatment efficacy for any CFTR-directed therapeutic, such as Ivacaftor or Lumacaftor. Associated methods of selecting and treating patients are described, along with related kits, uses, and drug discovery platforms.


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