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The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Patent No.:

US 11488687 B1

PDFFull Text
Date of Patent:
Nov. 01, 2022

Filed:

Dec. 14, 2017

System and method for improved estimation of functional potential of genomes and metagenomes

Applicant:

Tata Consultancy Services Limited, Mumbai, IN;

Inventors:

Sharmila Shekhar Mande, Pune, IN;

Swadha Anand, Pune, IN;

Kuntal Kumar Bhusan, Pune, IN;

Vineet Bhatt, Pune, IN;

Anwesha Mohapatra, Pune, IN;

Assignee:

TATA CONSULTANCY SERVICES LIMITED, Mumbai, IN;

Attorney:

Finnegan, Henderson, Farabow, Garrett & Dunner LLP

Primary Examiner:

Lori A Clow

Int. Cl.
CPC ...
G16B 20/20 (2019.01); G16B 20/00 (2019.01); G16B 40/00 (2019.01); G16B 40/30 (2019.01); G06N 7/00 (2006.01);
U.S. Cl.
CPC ...
G16B 20/20 (2019.02); G16B 20/00 (2019.02); G16B 40/00 (2019.02); G16B 40/30 (2019.02); G06N 7/005 (2013.01);
Abstract

A system and method for estimation of functional potential of pathways in genomes/meta-genomes is provided. Initially seed modules are identified and a multi-dimensional tag map is created. Further, pathway annotation is done using a novel 6Q annotation step. Hidden Markov Model (HMM) based search augmented with an analysis of gene context is used to refine the modules using a graph theory based approach. The method uses the multidimensional module tag map to build a backend knowledge base and use the same for an iterative literature search to verify the clustered organization of genes within a pathway. Finally, a score is assigned to compute the contribution of each pathway within the genome/meta-genome.

Find Patent Forward Citations

Mande, Sharmila. (2022). System and method for improved estimation of functional potential of genomes and metagenomes (U.S. Patent No. 11488687). U.S. Patent and Trademark Office. https://idiyas.com/patent/badge/11488687

Data source: USPTO (United States Patent and Trademark Office) public patent records. Weekly synchronization. How IDiyas builds this profile

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