The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Jan. 11, 2022

Filed:

May. 11, 2018
Applicant:

Noblis, Inc., Reston, VA (US);

Inventors:

Mychal W. Ivancich, Reston, VA (US);

Danielle E. Montoya, Woodbridge, VA (US);

Assignee:

NOBLIS, INC., Reston, VA (US);

Attorney:
Primary Examiner:
Int. Cl.
CPC ...
G16B 25/20 (2019.01); C12Q 1/6853 (2018.01); G16B 30/00 (2019.01); G16B 50/00 (2019.01); G16B 20/00 (2019.01); C12Q 1/6811 (2018.01); G16B 20/30 (2019.01); G16B 50/10 (2019.01); G16B 50/50 (2019.01); G16B 50/30 (2019.01);
U.S. Cl.
CPC ...
G16B 25/20 (2019.02); C12Q 1/6811 (2013.01); C12Q 1/6853 (2013.01); G16B 20/00 (2019.02); G16B 20/30 (2019.02); G16B 30/00 (2019.02); G16B 50/00 (2019.02); G16B 50/10 (2019.02); G16B 50/30 (2019.02); G16B 50/50 (2019.02);
Abstract

Techniques for identifying regions in nucleic acid sequences for which to design highly discriminatory primers are provided. In some embodiments, a corpus of nucleic acid sequences may be divided into a first set and a second set, and a respective index may be built containing data structures representing a plurality of k-mers of each nucleic acid sequence. By comparing the data structures of the first index to one another, a system may iteratively determine whether each k-mer over a given region in one of the nucleic acid sequences in the first set are also found in every other sequence in the first set. By comparing against the data structures in the second index, a system may then iteratively determine whether all k-mers in the region can be found in the same order of in any of the nucleic acid sequences in the second set.


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Ivancich, Mychal. (2022). Primer design using indexed genomic information (U.S. Patent No. 11222712). U.S. Patent and Trademark Office. https://idiyas.com/patent/badge/11222712

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