The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Nov. 10, 2020

Filed:

Oct. 17, 2014
Applicant:

Seven Bridges Genomics Inc., Charlestown, MA (US);

Inventor:

Deniz Kural, Cambridge, MA (US);

Assignee:

Seven Bridges Genomics Inc., Charlestown, MA (US);

Attorney:
Primary Examiner:
Int. Cl.
CPC ...
G16B 30/00 (2019.01); G16B 45/00 (2019.01); G16B 50/00 (2019.01); G16B 30/20 (2019.01);
U.S. Cl.
CPC ...
G16B 30/00 (2019.02); G16B 45/00 (2019.02); G16B 50/00 (2019.02); C12Q 2537/165 (2013.01); G16B 30/20 (2019.02);
Abstract

The invention includes methods for aligning reads (e.g., nucleic acid reads, amino acid reads) to a reference sequence construct, methods for building the reference sequence construct, and systems that use the alignment methods and constructs to produce sequences. The invention also includes methods and systems for evaluating the quality of the alignment between the reads and the reference sequence construct. The method is scalable, and can be used to align millions of reads to a construct thousands of bases or amino acids long. The invention additionally includes methods for identifying a disease or a genotype based upon alignment of nucleic acid reads to a location in the construct.


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