The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Jun. 09, 2020

Filed:

Oct. 11, 2014
Applicant:

International Business Machines Corporation, Armonk, NY (US);

Inventors:

Jian Dong Ding, Shanghai, CN;

Min Gong, Shanghai, CN;

Yun Jie Qiu, Shanghai, CN;

Junchi Yan, Shanghai, CN;

Ya Nan Zhang, Shanghai, CN;

Attorneys:
Primary Examiner:
Int. Cl.
CPC ...
G16B 20/00 (2019.01); G06F 16/174 (2019.01); G06F 16/22 (2019.01); G06F 16/2455 (2019.01); G16B 30/00 (2019.01);
U.S. Cl.
CPC ...
G16B 20/00 (2019.02); G06F 16/1744 (2019.01); G06F 16/2228 (2019.01); G06F 16/2455 (2019.01); G16B 30/00 (2019.02);
Abstract

The present invention relates to a method and apparatus for genome compression and decompression. In one embodiment of the present invention, there is a method for genome compression, including: selecting from a reference database a reference genome that matches the genome; building an index based on positions of the reference genome's multiple segments in the reference genome; aligning the genome with the reference genome based on the multiple segments so as to identify difference data between the genome and the reference genome; and generating a compressed genome, the compressed genome including at least the index and the difference data. In other embodiments, there is provided an apparatus for genome compression. Further, there is a method and apparatus for decompressing the genome that has been compressed using the above method and apparatus.


Find Patent Forward Citations

Loading…