The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
Nov. 12, 2019

Filed:

Jan. 18, 2016
Applicant:

The University of British Columbia, Vancouver, CA;

Inventors:

Neil R. Cashman, Vancouver, CA;

Steven S. Plotkin, Vancouver, CA;

William C. Guest, Vancouver, CA;

Assignee:
Attorneys:
Primary Examiner:
Int. Cl.
CPC ...
G01N 33/48 (2006.01); G16B 5/00 (2019.01); G16B 20/00 (2019.01); C07K 16/28 (2006.01); C07K 16/40 (2006.01); C07K 14/705 (2006.01); C12N 9/02 (2006.01); C12N 9/12 (2006.01); G06N 3/12 (2006.01); G06N 7/00 (2006.01); G16B 15/00 (2019.01); A61K 39/00 (2006.01);
U.S. Cl.
CPC ...
G16B 5/00 (2019.02); C07K 14/70596 (2013.01); C07K 16/2863 (2013.01); C07K 16/2872 (2013.01); C07K 16/40 (2013.01); C12N 9/0089 (2013.01); C12N 9/12 (2013.01); G06N 3/126 (2013.01); G06N 7/005 (2013.01); G16B 15/00 (2019.02); G16B 20/00 (2019.02); A61K 2039/505 (2013.01); C07K 2317/34 (2013.01); C07K 2317/73 (2013.01); C12Y 115/01001 (2013.01); C12Y 207/10001 (2013.01);
Abstract

A method and system to identify an epitope unique to a misfolded form of a protein is provided. Sets of one or more amino acid residues are selected from a model representing the structure of the protein; the free energy of unfolding of each set is determined; and the epitope is identified from the sets having a total probability of unfolding above a minimum probability or a free energy of unfolding below a minimum energy. In other aspects, the invention provides for the use of epitopes identified by the epitope prediction methods, and related antibodies, to diagnose and treat disease and to screen samples for the presence of such epitopes.


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