The patent badge is an abbreviated version of the USPTO patent document. The patent badge does contain a link to the full patent document.

The patent badge is an abbreviated version of the USPTO patent document. The patent badge covers the following: Patent number, Date patent was issued, Date patent was filed, Title of the patent, Applicant, Inventor, Assignee, Attorney firm, Primary examiner, Assistant examiner, CPCs, and Abstract. The patent badge does contain a link to the full patent document (in Adobe Acrobat format, aka pdf). To download or print any patent click here.

Date of Patent:
May. 28, 2019

Filed:

May. 16, 2016
Applicant:

Expression Pathology, Inc., Rockville, MD (US);

Inventors:

David Krizman, Gaithersburg, MD (US);

Todd Hembrough, Gaithersburg, MD (US);

Sheeno Thyparambil, Frederick, MD (US);

Assignee:

Expression Pathology, Inc., Rockville, MD (US);

Attorney:
Primary Examiner:
Int. Cl.
CPC ...
G01N 33/74 (2006.01); G01N 30/88 (2006.01); G01N 33/483 (2006.01); G01N 33/68 (2006.01);
U.S. Cl.
CPC ...
G01N 33/6872 (2013.01); G01N 33/4833 (2013.01); G01N 33/68 (2013.01); G01N 33/6848 (2013.01); G01N 33/74 (2013.01); G01N 2030/8831 (2013.01); G01N 2333/71 (2013.01); G01N 2333/82 (2013.01); G01N 2560/00 (2013.01); G01N 2800/52 (2013.01); G01N 2800/56 (2013.01);
Abstract

Specific peptides are provided, and derived ionization characteristics of those peptides, from the Hepatocyte Growth Factor Receptor (cMET) protein. The peptides are particularly and surprisingly advantageous for quantifying by the method of Selected Reaction Monitoring (SRM) mass spectrometry the cMET protein directly in biological samples that have been fixed in formalin, or what can also be termed as Multiple Reaction Monitoring (MRM) mass spectrometry. Such biological samples are chemically preserved and fixed where the biological sample is selected from tissues and cells treated with formaldehyde containing agents/fixatives including: formalin-fixed tissue/cells; formalin-fixed/paraffin embedded (FFPE) tissue/cells; FFPE tissue blocks and cells from those blocks; and tissue culture cells that have been formalin fixed and or paraffin embedded. A protein sample is prepared from the biological sample using the Liquid Tissue™ reagents and protocol and the cMET protein is quantitated in the Liquid Tissue™ sample by the method of SRM/MRM mass spectrometry by quantitating in the protein sample at least one or more of the peptides described. These peptides can be quantitated if they reside in a modified or an unmodified form. An example of a modified form of a cMET peptide is phosphorylation of a tyrosine, threonine, serine, and/or other amino acid residues within the peptide sequence.


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