Indiana University

Texas Tech University System

Advanced Research & Technology Institute

Yehia S Mechref

Milos V Novotny

Tony J Tegeler

James P Reilly

Kirk S Boraas

Haixu Tang

Pilsoo Kang

Yunping Huang

Illustrative embodiments of methods and apparatus for identifying one or more intact glycopeptides in a sample are disclosed. According to one illustrative embodiment, a method may comprise receiving data representing a plurality of mass spectra obtained from mass spectrometry of the sample, scoring data representing each of the plurality of mass spectra against data associated with target glycopeptides, and identifying one or more intact glycopeptides in the sample based at least in part on the scoring of the data representing each of the plurality of mass spectra.

Identification and quantification of intact glycopeptides in complex samples

A solid-phase permethylation procedure is described. For example, solid-phase permethylation can be utilized to prepare permethylated linear and branched, neutral and sialylated oligosaccharides, which can be analyzed by MALDI-MS.

Permethylation of oligosaccharides

A device for placement of effluent comprises a substrate positioner, a deposition conduit, and a conduit positioner. The substrate positioner supports and positions a substrate on which effluent exiting from the deposition conduit is to be deposited. The conduit positioner moves an exit end of the deposition conduit relative to the substrate.

Device for placement of effluent

A system and method of incubating a liquid is provided. The system is well-suited for incubating small volumes of liquid at high temperatures. The liquid may be a reaction mixture comprising a glycoprotein. During the incubation process, oligosaccharides may be removed from the glycoprotein.

High temperature incubation system and method for small volumes

A fluid treatment device is disclosed for mixing first and second fluids. The first fluid may be a treatment liquid that is contained in a container and that is used to change a property, such as the pH, density or ionic strength, of the second fluid. In some illustrative embodiments, the fluid treatment device is used to create an effluent by adding a buffer material and/or a matrix material to an analyte for subsequent MALDI MS analysis of the effluent. A mixing space is defined in a container between ends of first and second conduits. In some embodiments, a junction member couples together the ends of the first and second conduits. The junction member has a main passage that receives the ends of the first and second conduits. The junction member has at least one opening that provides fluid communication between an interior region of the container and the mixing space.

Growing community of inventors

Bloomington, IN, United States of America

Yehia S Mechref