International Business Machines Corporation

Arizona Technology Development Corporation

Wen-jeng Ko

Cheng-Chung Song

David W Sammons

Yi-Cheng Liu

In a data processing system having multiple input/output adapters, a DMA memory block is assigned to each adapter. The DMA memory block has a data area and a generic common control area. All adapters have the same translation control entry for the control area. The control area includes a mapped page assigned to each adapter request and an unmapped buffer space interposed between the mapped pages. By mapping the generic DMA memory, memory space which is not required by an adapter is not mapped unnecessarily. Because the generic DMA memory space is part of each adapter's DMA memory space, adapters are unable to write to partitions to which they do not belong and the possibility of cross-partition memory writes is reduced. Moreover, runaway writes to dedicated DMA memory space may be caught as soon as they occur.

Generic DMA memory space mapping

This invention teaches a computerized method for use in data acquisition and manipulation of two-dimensional patterns in the fields of medicine, astronomy, chemistry, biology and biotechnology. The invention teaches an interactive computerized method for matching visual patterns of polypeptide spots in two-dimensional (2-D) gel electrophoretogram solubilized into polypeptide constituents that are separated by electrophoresis. The computerized method manipulates spot pixel coordinates using staged coordinate transformation techniques on spot markers and unknown study spots to reduce gel preparation distortions and allows a user to produce matching results in a manner that compares the transformed spot data using either a single reference gel or multiple reference gels approach for producing the matching results. The method also includes a spot matching verification step and a step to extract potentially mis-matched spots from reported matching results. The user can also resolve contradictions and perform spot matching analysis using isoelectric focusing (PI), and molecular weight (MW) dimensional separation data.

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Tucson, AZ, United States of America

Wen-jeng Ko