International Business Machines Corporation

Thomas Charles Conway

Fang Lu

Lenin Mehedy

Shaila Pervin

Mani Abedini

Fatemeh Jalali

Laura Irina Rusu

Kelly L Wyres

Fatemah Jalali

Ismael A Vergara Correa

A result format modifying method, system, and non-transitory computer readable medium, include extracting, from a database including a plurality of display format types of a search result of a search conducted by a user, the plurality of display format types of the search result conducted by the user, and deciding a display format of the plurality of display format types to output to the user based on a time interval between a current time and the start time of the user's next activity as determined by the determining, where the display format of the search result to the user corresponds to a delivery that is digestible by the user within a specific length of a time interval out of a first time interval and a second time interval, the first time interval being longer than the second time interval.

System, method, recording medium for dynamically changing search result delivery format

Aspects include querying, by a processing system, a workflow database for a desired target entity. The processing system traverses a dependency graph that defines one or more entity and action sequences of a workflow that result in creating the desired target entity based at least in part on failing to locate the desired target entity in the workflow database. The workflow can be a bioinformatics workflow to analyze one or more digital representations of biological data. The processing system queries the workflow database to determine an entity existence status of each entity in the one or more entity and action sequences. The processing system schedules execution of an associated action that outputs each entity identified as non-existent based at least in part on the entity existence status and the one or more entity and action sequences to create the desired target entity.

Dependency-driven workflow management

A method for predicting the presence of melanoma comprises performing molecular profiling of at least one of genomic and transcriptomic material extracted from a skin swab sample collected from a lesion of a patient, extracting one or more biological features from the molecular profiling, comparing the one or more extracted biological features to one or more biological features corresponding to one or more reference skin swab samples collected from a plurality of reference patients, and predicting, based on the comparing, whether the lesion of the patient is cancerous.

Methods for the diagnosis and prognosis of melanoma from topical skin swabs

Short fixed length sub-sequences, defined as reference sub-sequences, are extracted from a collection of reference sequences, and an index is constructed showing which short fixed length reference sub-sequence occurs in which reference sequences. Short fixed length sub-sequences, the same length as the reference sub-sequences and defined as source sub-sequences, are extracted from a collection of source sequences derived from a sample for which the signature is to be determined, and the short fixed length source sub-sequences are compiled to determine the frequency of each within the collection. The presence or absence of source sub-sequences in combination with the index is used to infer the presence or absence of reference sequences from the reference collection.

Biological sequence variant characterization

A result format modifying method, system, and non-transitory computer readable medium, include an extracting circuit configured to extract a plurality of format types of a search result conducted by a user, a determining circuit configured to determine user activity based on user data, and a deciding circuit configured to decide a format of the plurality of format types to deliver to the user based on a time interval between a current time and a start time of the user's next activity as determined by the determining circuit.

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Heidelberg West, Australia

Thomas Charles Conway