Leland Stanford Junior University

Other

Radware, Ltd.

Stephen W Meehan

Leonore A Herzenberg

Wayne A Moore

David R Parks

Guenther Walther

Darya Y Orlova

Kent Douglas Alstad

Michael R Benna

Shawn David Bissell

Noah Zimmerman

Mark Musen

Connor Meehan

Connor G W Meehan

Stephan M Weissman

James Tung

Some embodiments provide methods, systems and computer-readable media that employ adaptive binning and dissimilarity scores based on a quadratic form distance for multidimensional data for matching clusters in data corresponding to different sample. Some embodiments provide methods, systems and computer-readable media for rendering a first interactive display including a two-dimensional plot of at least a portion of a multidimensional data set and a corresponding second interactive display including a plurality of single parameter charts or histograms, each displaying information corresponding to one-dimensional measurements of a different parameter in the multidimensional data set.

Systems and methods for cluster matching across samples and guided visualization of multidimensional cytometry data

The described invention provides a method and/or system for analyzing data using population clustering through density based merging, and a method for guiding clustering strategy through entropy-based ranking score.

Cluster processing and ranking methods including methods applicable to clusters developed through density based merging

The invention describes a system and method for searching, organizing and displaying information in a user-specified flexible context that enables users to create customized hierarchical views and groupings. The formats for acquiring search results may be stored so that they may be re-applied to the same data or any similarly structured data in subsequent sessions.

System and method for organizing data in a dynamic user-customizable interface for search and display

A method and system for creating, distributing, and managing of shared compression dictionaries. The system comprises a compressor configured to generate at least one shared compression dictionary based on a context of data streams flow between a client web browser and an origin server; an origin accelerator communicatively connected to the origin server and configured to encode an encountered data stream to a compressed form based on the least one shared compression dictionary; and an edge accelerator communicatively connected to the client web browser and configured to decode the compressed form of the data stream to an uncompressed form using the least one shared compression dictionary.

System and method for creation, distribution, application, and management of shared compression dictionaries for use in symmetric HTTP networks

The invention provides a system and method for selecting an optimal multimarker reagent combination for the identification and/or quantification of molecules in or on cells with or without reference to fluorescence or other properties of at least one fluorescent dye or other instrument-measurable atom or molecule associated directly or indirectly with the reagent combination. The method includes specifying, using a computer, a plurality of markers to be detected by a plurality of reagents, generating, using a computer, a plurality of reagent combinations comprising the plurality of reagents to detect the plurality of markers, wherein the reagent combinations are ranked according to at least one user-defined or system-defined criterion, and selecting the optimal reagent combination or providing a rank-ordered list of combinations.

System and method for selecting a multiparameter reagent combination and for automated fluorescence compensation

This invention relates to the field of flow cytometry. It provides methods for identifying important dye-detector spectral overlaps for use in designing flow cytometry experiments. It further provides methods for quantifying the impact of spectral overlaps on dye selection and detector selection, the methods including the steps of: a) obtaining spectra of a dye; b) obtaining a laser configuration and an optical filter configuration of a detector; c) obtaining a spectrum yield value; and d) ranking the spectrum yield value.

Method for pre-identification of spectral overlaps within fluorescent dye and detector combinations used in flow cytometry

The present invention provides computer program products, systems, and related methods of coordinating a knowledge base.

Methods, software, and systems for knowledge base coordination

The present invention is related to databases and the exchange of scientific information. Specifically the invention discloses a laboratory data management system including a knowledge base that stores characteristics of laboratory reagents, experiment subjects, tissues and cells. The invention also includes an experiment input module that accepts input of parameters of an experiment and data from a knowledge base module. Further, the invention includes a protocol creator connected to the knowledge base module and the experiment input module that creates a laboratory protocol for an experiment based on data supplied from the knowledge base module and the experiment input module. The invention also includes methods to use the described system.

Growing community of inventors

Burnaby, Canada

Stephen W Meehan